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Guides

Setting Up a Decentralized Storage Solution for Medical Imaging Data

A technical guide for developers to integrate Filecoin, Arweave, and Storj for secure, cost-efficient storage of large medical imaging files like MRIs and CT scans.
Chainscore © 2026
introduction
DECENTRALIZED STORAGE FOR HEALTHCARE

Introduction

This guide explains how to build a decentralized storage system for medical imaging data using IPFS, Filecoin, and smart contracts.

Medical imaging data, including MRIs, CT scans, and X-rays, is critical for diagnosis and treatment but presents significant storage challenges. Centralized cloud providers create single points of failure, high long-term costs, and complex data governance. Decentralized storage offers a solution by distributing data across a global network of independent storage providers, enhancing security, resilience, and patient data sovereignty. This paradigm shift is essential for handling the massive volume and sensitivity of DICOM files and other healthcare data formats.

The core technical stack for this solution involves three layers. The storage layer uses the InterPlanetary File System (IPFS) for content-addressed storage and retrieval, where each file gets a unique Content Identifier (CID). For persistent, incentivized storage, data is backed up on Filecoin via storage deals. The orchestration layer is managed by smart contracts on a blockchain like Ethereum or Polygon, which handle access permissions, audit logs, and payment logic. Finally, a client application provides the interface for healthcare providers to upload, manage, and access patient records.

Implementing this system requires addressing key Web3 concepts. Content addressing ensures data integrity, as the CID is a cryptographic hash of the file's content. Data encryption is mandatory before storage; client-side encryption using libraries like libsodium ensures only authorized parties with decryption keys can view the data. Smart contracts define access control lists (ACLs) that map patient or provider wallet addresses to specific CIDs, creating a permissioned system on a public blockchain. This setup moves away from trust in a single institution to verifiable, cryptographic rules.

A practical workflow begins with a frontend application. A healthcare provider uploads a DICOM file, which the client application encrypts. The encrypted payload is pinned to an IPFS node (self-hosted or via a service like Pinata or web3.storage), returning a CID. This CID, along with access rules, is sent to the smart contract. Concurrently, a backend service can orchestrate a Filecoin storage deal for the CID to guarantee long-term persistence. To retrieve data, the application checks the smart contract for permissions, fetches the encrypted data from IPFS using the CID, and decrypts it locally for the authorized user.

This architecture offers tangible benefits over traditional systems. It reduces reliance on costly, centralized infrastructure while providing cryptographic proof of data integrity and storage. Patient data becomes portable and interoperable, not locked into a single vendor's system. Furthermore, an immutable audit log on the blockchain creates a transparent record of all access events, which is crucial for compliance with regulations like HIPAA and GDPR. The system's resilience comes from data redundancy across geographically distributed storage providers.

The following sections will provide a step-by-step implementation guide. We will cover setting up the development environment, writing and deploying the access control smart contract using Solidity and Hardhat, integrating IPFS and Filecoin via SDKs, and building a basic React frontend for encryption and upload. The goal is to provide a functional prototype that demonstrates how decentralized technologies can create more secure, patient-centric medical data systems.

prerequisites
FOUNDATION

Prerequisites

Before deploying medical imaging data on a decentralized network, you must establish the core technical and conceptual foundation.

This guide assumes you have a working understanding of blockchain fundamentals and Web3 development. You should be comfortable with concepts like public/private key cryptography, wallets (e.g., MetaMask), gas fees, and smart contract interactions. Familiarity with a blockchain like Ethereum, Polygon, or Filecoin is essential, as they are common backbones for decentralized storage protocols. You will also need Node.js (v18 or later) and npm or yarn installed on your development machine to run the necessary tooling and SDKs.

For handling medical imaging data, you must have a basic grasp of the relevant data formats and standards. Common formats include DICOM (Digital Imaging and Communications in Medicine) for radiology and NIfTI (Neuroimaging Informatics Technology Initiative) for brain imaging. Understanding how to parse metadata from these files is crucial for organizing and indexing data on-chain. You will also need to consider data preprocessing steps, such as anonymization (removing Protected Health Information - PHI) and potential conversion to more web-friendly formats like JPEG/PNG for previews, while retaining the original high-fidelity data.

The core of this setup involves choosing and integrating a decentralized storage protocol. We will focus on IPFS (InterPlanetary File System) for content-addressed storage and Filecoin for persistent, incentivized storage. You will need to interact with their JavaScript libraries: ipfs-http-client or web3.storage for IPFS, and @filecoin-shipyard/lotus-client-provider-browser or the Filecoin Saturn network for retrievals. For on-chain coordination, such as storing content identifiers (CIDs) or access control logic, you will use a smart contract framework like Hardhat or Foundry.

Finally, ensure you have a test environment configured. This includes a local IPFS node (e.g., IPFS Desktop or Kubo) for development, testnet FIL tokens from a Filecoin faucet for the Calibration network, and testnet ETH/MATIC for deploying any auxiliary smart contracts. Having these components ready will allow you to follow the subsequent implementation steps without interruption.

key-concepts-text
TECHNICAL GUIDE

Setting Up a Decentralized Storage Solution for Medical Imaging Data

A practical guide to architecting a HIPAA-compliant system for storing and managing sensitive medical imaging data using decentralized storage protocols like IPFS and Filecoin.

Medical imaging data—including MRIs, CT scans, and X-rays—presents a significant storage challenge due to its large file sizes, long-term retention requirements, and stringent privacy regulations like HIPAA. Traditional centralized cloud storage introduces single points of failure, vendor lock-in, and ongoing subscription costs. Decentralized storage networks offer a compelling alternative by distributing data across a global network of independent storage providers, enhancing durability, censorship-resistance, and potentially lowering long-term archival costs. For healthcare applications, this architecture must be built with data encryption, access control, and auditability as foundational principles.

The core technical stack typically involves a content-addressed storage layer and a persistent storage layer. IPFS (InterPlanetary File System) is ideal for the content layer, providing a peer-to-peer network where each file receives a unique Content Identifier (CID) based on its cryptographic hash. This ensures data integrity—any alteration changes the CID. However, IPFS alone does not guarantee persistence. For long-term, guaranteed storage of these large DICOM files, you integrate a protocol like Filecoin. Filecoin creates verifiable storage deals with providers, who put up collateral to prove they are storing your data correctly over time, creating a robust economic incentive for data persistence.

Before any data is uploaded, it must be encrypted client-side. For medical data, this is non-negotiable. A common pattern is to encrypt each DICOM file using a symmetric key (e.g., AES-256-GCM) and then encrypt that key with the public key of an authorized user or system, storing the encrypted key on-chain or in a secure metadata store. This ensures that storage providers never have access to the plaintext data. Libraries like libsodium or ethers.js can handle this encryption. The encrypted file is then added to IPFS, which returns the CID. This CID, along with the encrypted key and access policies, forms the on-chain record that governs data access.

Smart contracts on a blockchain like Ethereum, Polygon, or a dedicated healthcare chain (e.g., Hedera) act as the access control and audit layer. A contract can store a mapping between a patient ID, the CID of their encrypted scan, and the encrypted decryption keys for authorized entities (e.g., a doctor's public address). When a doctor needs to view an image, their client application queries the smart contract, retrieves the CID and their encrypted key, decrypts the key with their wallet's private key, fetches the file from IPFS/Filecoin, and finally decrypts the image locally. Every access request can be logged as an immutable event on the blockchain, creating a perfect audit trail.

A practical implementation involves using SDKs like web3.storage, Lighthouse, or NFT.Storage which bundle IPFS pinning and Filecoin deals. For example, using the web3.storage JavaScript client, you can upload an encrypted file and register its CID for long-term storage with a few lines of code. The backend system must manage user authentication (via OAuth2 or DID), handle key encryption/decryption, and interact with the access control smart contract. It's critical to run extensive tests on a testnet (like Filecoin Calibration) with dummy data before deploying a production system handling real Protected Health Information (PHI).

Key considerations for a production deployment include data redundancy (storing multiple copies with different providers), retrieval speed (using IPFS gateways or caching layers for frequent access), and compliance documentation. While the decentralized storage itself is robust, your application's front-end and key management system are critical security points. Regular security audits, adherence to the principle of least privilege in smart contract logic, and clear data deletion procedures (by destroying encryption keys) are essential for maintaining a HIPAA-compliant, patient-centric imaging archive that leverages the strengths of Web3 infrastructure.

MEDICAL IMAGING USE CASE

Decentralized Storage Protocol Comparison

Comparison of leading protocols for storing sensitive, large-scale medical imaging data.

Feature / MetricFilecoinArweaveStorjIPFS (Pinning Services)

Persistence Model

Long-term via storage deals & incentives

Permanent, one-time payment

Time-based, renewable contracts

Ephemeral unless pinned

Data Redundancy

Geo-distributed, multi-provider replication

Global permaweb node network

80+ erasure-coded pieces globally

Depends on pinning service

HIPAA/GDPR Compliance

Possible with private deals & encryption

Not designed for private data

Enterprise tier with BAA

Varies by service provider

Retrieval Speed (Hot Storage)

Minutes to hours (varies by deal)

Seconds to minutes

< 500 ms (CDN-backed)

Seconds to minutes

Cost Model (per TB/month)

$1.5 - $4.5 (varies by deal)

~$8.5 (one-time for 200 yrs)

$4 - $20 (bandwidth included)

$15 - $50 (managed service)

Native Encryption

Client-side only

No

Client-side at rest & in transit

Client-side only

Max Single File Size

32 GiB (on-chain), 64 GiB (off-chain)

No practical limit

5 TiB

Varies by service, typically > 5 GB

Data Deletion

Provider can delete after deal ends

Impossible by design

Client-controlled, secure erasure

Client-controlled via pin removal

TECHNICAL COMPARISON

Implementation by Platform

Core Architecture

IPFS provides the content-addressed storage layer, while Filecoin adds a decentralized marketplace for long-term, verifiable storage deals. This combination is ideal for medical imaging, where data integrity and long-term archival are critical.

Implementation Steps

  1. Ingest Data: Use the IPFS CLI or a client library (like ipfs-http-client) to add DICOM files to your local node, generating a unique Content Identifier (CID).
  2. Make Storage Deal: Use the Filecoin client (lotus) or a provider like Estuary or Web3.Storage to propose a storage deal with miners. Specify replication factor and duration.
  3. Retrieve Data: Fetch data via its CID from the IPFS network. For Filecoin-stored data, you may need to pay for retrieval unless using a free retrieval service.

Key Considerations

  • Cost Model: Pay upfront for proven storage duration. Prices are dynamic based on network demand.
  • Retrieval Speed: IPFS offers fast, peer-to-peer retrieval; Filecoin retrieval can have latency and cost.
  • Tools: Use Powergate by Textile to manage the IPFS hot layer and Filecoin cold layer seamlessly.
bash
# Example: Add a file to IPFS and get its CID
ipfs add patient_scan.dcm
> added QmXyz...abc patient_scan.dcm
encryption-access-control
TUTORIAL

Implementing Encryption and Access Control

A step-by-step guide to securing medical imaging data on decentralized storage networks using client-side encryption and programmable access policies.

Storing sensitive medical imaging data like MRIs and CT scans on decentralized networks requires a zero-trust architecture. This means encryption must happen on the client side before any data leaves your application. You should never rely on a storage provider to handle encryption. For this, we use established cryptographic libraries. In JavaScript/TypeScript environments, the libsodium-wrappers library is a robust choice for generating encryption keys and performing symmetric encryption using the XChaCha20-Poly1305 algorithm, which provides strong confidentiality and integrity.

The core process involves splitting the workflow into distinct phases. First, encrypt the DICOM file locally using a unique, randomly generated data encryption key (DEK). Second, encrypt that DEK with a public key, allowing only the holder of the corresponding private key to decrypt it. This encrypted DEK, known as the encrypted key, is small metadata that can be stored alongside the ciphertext. The actual encrypted image file and the encrypted key are then uploaded to a decentralized storage service like IPFS, Filecoin, or Arweave, resulting in unique Content Identifiers (CIDs) for each.

Access control is enforced not at the storage layer, but through the management of decryption keys. This is where smart contracts or decentralized protocols become essential. You can use a contract on a blockchain like Ethereum or Polygon to act as a permissions registry. The contract maps user wallet addresses (or decentralized identifiers) to the CIDs of the encrypted keys they are authorized to access. When a user requests an image, your application checks the contract, retrieves the permitted encrypted key CID, fetches it from storage, and only then can the user decrypt it locally with their private key.

For a practical implementation, consider this workflow using IPFS and Ethereum:

  1. Generate a key pair for a user using libsodium.crypto_box_keypair().
  2. Encrypt a DICOM file: const ciphertext = sodium.crypto_aead_xchacha20poly1305_ietf_encrypt(fileBytes, null, null, dataKey).
  3. Encrypt the data key with the user's public key: const encryptedKey = sodium.crypto_box_seal(dataKey, userPublicKey).
  4. Upload ciphertext and encryptedKey to IPFS, receiving CIDs cidData and cidKey.
  5. Store the permission on-chain: accessRegistry.grantAccess(userAddress, cidKey).

This pattern ensures cryptographic proof of access is required for decryption. Advanced setups can implement time-based access (expiring grants), multi-party approval (requiring signatures from multiple keys), or attribute-based encryption for research cohorts. The decentralized storage layer provides persistence and availability, while the blockchain provides an immutable, auditable log of all access grants and revocations, creating a compliant and secure system for handling PHI (Protected Health Information).

When implementing, audit your key management lifecycle. Private keys should be secured in hardware modules or trusted execution environments when possible. Always use content-addressed storage (like IPFS CIDs) to guarantee data integrity—the CID is a hash of the ciphertext, so any tampering is detectable. Frameworks like Spheron or web3.storage can simplify uploads, but the encryption logic must remain under your application's control to maintain the security model.

STRATEGY COMPARISON

Cost Optimization and Storage Strategies

Comparison of primary storage models for balancing cost, redundancy, and access speed in medical imaging applications.

Feature / MetricHot Storage (IPFS + Filecoin)Warm Storage (Arweave)Cold Storage (Filecoin Deep Cold)

Estimated Cost per GB/Month

$0.01 - $0.05

$0.85 (one-time)

$0.0005 - $0.002

Data Retrieval Latency

< 5 seconds

< 2 minutes

6-24 hours

Redundancy Guarantee

10-30x via Filecoin deals

~200+ replicas via Permaweb

1000x via verified storage

Ideal Data Type

Frequently accessed recent studies

Reference images, legal archives

Long-term compliance archives

Provider Examples

Web3.Storage, NFT.Storage

ArDrive, Bundlr Network

Estuary, Lotus node deals

HIPAA Compliance Ready

Smart Contract Automation

Deletion/Modification

Possible (expiring deals)

Impossible (permanent)

Possible (deal expiration)

ensuring-rapid-retrieval
TECHNICAL GUIDE

Setting Up a Decentralized Storage Solution for Medical Imaging Data

A step-by-step guide to implementing a decentralized storage system for medical imaging, balancing data integrity with the rapid retrieval demands of clinical workflows.

Decentralized storage networks like Filecoin, Arweave, and IPFS offer a paradigm shift for managing sensitive medical imaging data. Unlike centralized cloud providers, these systems distribute data across a global network of independent storage providers, enhancing data redundancy and censorship resistance. For medical applications, this architecture provides a robust, verifiable audit trail for patient records and imaging studies, crucial for compliance with regulations like HIPAA and GDPR. The core challenge, however, is ensuring that this distributed data remains instantly accessible for time-sensitive clinical decisions.

The foundation of rapid retrieval is a well-architected content addressing and caching layer. When a DICOM (Digital Imaging and Communications in Medicine) file is stored, it receives a unique Content Identifier (CID) derived from its content, such as an IPFS CID. This CID is immutable; any change to the file generates a new CID. To enable fast access, you must implement a pinning service or use a Filecoin Storage Provider with proven retrieval performance. Services like web3.storage, NFT.Storage, or Estuary abstract the complexity, providing HTTP gateways that cache popular content at the edge, delivering sub-second retrieval times for frequently accessed images.

For clinical integration, your application's backend must manage the mapping between patient records and decentralized storage CIDs. A common pattern involves storing metadata—patient ID, study date, CID—on a blockchain or a conventional, fast database. The retrieval flow is: 1) Query the database for the patient's study CID, 2) Fetch the image data via a dedicated HTTP gateway (e.g., https://<cid>.ipfs.dweb.link), and 3) Serve it to the hospital's Picture Archiving and Communication System (PACS). Using a dedicated gateway with a CDN (Content Delivery Network) and persistent pinning ensures the data is readily available, avoiding the latency of locating it on the peer-to-peer network.

Code integration is straightforward. Using the web3.storage JavaScript client, you can upload and retrieve files with a few lines of code. For example, to store a DICOM file: const cid = await client.put([file]). To retrieve it for display, you construct the gateway URL. For systems requiring guaranteed long-term storage, you can create a Filecoin storage deal programmatically using the Lotus client or a service like Estuary, which replicates data across multiple miners and provides retrievability metrics. This combines permanent, verifiable storage with a hot cache for clinical use.

Key considerations for production include data encryption before upload to maintain patient confidentiality, selecting storage providers in compliant jurisdictions, and implementing a robust key management system. Performance must be continuously monitored; tools like Textile's Powergate can help manage hot (IPFS) and cold (Filecoin) storage tiers automatically. By leveraging decentralized storage for its integrity guarantees and pairing it with intelligent caching and gateway services, healthcare institutions can build imaging archives that are both tamper-proof and clinically responsive.

DEVELOPER FAQ

Frequently Asked Questions

Common technical questions and troubleshooting steps for implementing decentralized storage in medical imaging applications.

The primary protocols are Filecoin, Arweave, and IPFS. Each serves a different purpose:

  • Filecoin: A blockchain-based storage marketplace for persistent, verifiable storage. It's ideal for long-term archival of large datasets like DICOM files, as it uses cryptographic proofs to ensure data is stored over time.
  • Arweave: Provides permanent, one-time-pay storage via its "permaweb." It's suitable for reference data that must never be altered, such as finalized diagnostic reports or research datasets.
  • IPFS (InterPlanetary File System): A peer-to-peer hypermedia protocol for content-addressed storage. It's excellent for caching and distributing frequently accessed data but does not guarantee persistence on its own; it's often used in conjunction with Filecoin or Arweave for pinning.

For medical imaging, a common architecture uses IPFS for fast retrieval and Filecoin for guaranteed, cost-effective long-term storage.

conclusion
IMPLEMENTATION SUMMARY

Conclusion and Next Steps

You have now configured a decentralized storage solution for medical imaging data, integrating Filecoin for archival, IPFS for content addressing, and smart contracts for access control.

This architecture provides a robust foundation for managing sensitive medical data. By leveraging Filecoin's persistent, incentivized storage and IPFS's content-addressed retrieval, you ensure data availability and integrity. The access control layer, managed via smart contracts on a blockchain like Ethereum or Polygon, enforces patient consent and audit trails. This setup addresses key healthcare requirements: data sovereignty, immutability, and verifiable access logs, moving beyond the limitations of centralized cloud storage.

To operationalize this system, focus on the following next steps. First, implement a robust frontend client (e.g., using React or a mobile SDK) for patients and providers to upload, manage permissions, and view data. Second, develop oracle services or use a protocol like Chainlink to bring real-world verification events (like a doctor's credential check) on-chain to trigger smart contract logic. Finally, establish a disaster recovery plan that includes geographic distribution of storage providers and regular integrity checks using Filecoin's proof mechanisms.

For developers looking to extend this system, consider integrating zero-knowledge proofs (ZKPs) for enhanced privacy. Libraries like circom and snarkjs can be used to create proofs that a scan meets certain diagnostic criteria without revealing the raw image data. Furthermore, explore data composability by allowing approved research institutions to query anonymized, aggregated datasets via tools like Bacalhau or Filecoin Virtual Machine (FVM) smart contracts, enabling federated learning while preserving patient confidentiality.

The long-term evolution of this stack will involve deeper blockchain integration. The Filecoin Virtual Machine (FVM) enables programmable storage deals and data DAOs, allowing for automated data lifecycle management. Keep abreast of EIP-4844 (Proto-Danksharding) and other L2 scaling solutions to reduce the cost and latency of on-chain access control transactions. Regularly audit your smart contracts and storage provider reputation using tools like Slingshot or Filplus to maintain a high standard of security and reliability.

Building a decentralized system for regulated data is an iterative process. Start with a pilot program for a specific, consented dataset. Engage with the open-source communities around IPFS, Filecoin, and Ethereum for support. Document your architecture decisions and compliance measures clearly, as they will be crucial for institutional adoption. The goal is to create a patient-centric data ecosystem that is both technologically resilient and ethically sound.