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Guides

How to Architect a zkML System for Identity Verification

This guide provides a technical blueprint for implementing a zero-knowledge machine learning system to perform privacy-preserving identity verification, such as proving age or document validity without revealing the underlying data.
Chainscore © 2026
introduction
ARCHITECTURE GUIDE

How to Architect a zkML System for Identity Verification

A technical guide to designing a zero-knowledge machine learning system for secure, private identity verification, covering core components and implementation patterns.

Zero-knowledge machine learning (zkML) merges cryptographic privacy with AI inference, enabling identity verification without exposing the underlying biometric data or model parameters. The core architectural challenge is separating the prover (client-side computation) from the verifier (on-chain validation). A typical system flow involves a user submitting an encrypted or hashed input (e.g., a facial embedding), a prover generating a zk-SNARK proof that this input matches a known identity against a private ML model, and a verifier smart contract checking the proof's validity. This architecture ensures the model weights and the user's raw data remain confidential.

The first component to design is the prover pipeline. This off-chain service must load the pre-trained ML model (like a ResNet for face recognition) and compile it into a zk-SNARK circuit using frameworks like Circom or Halo2. The circuit encodes the model's forward pass—the mathematical operations from input to output—as a set of constraints. For identity, the output is often a similarity score. The prover then generates a proof attesting: "I ran the private model on some private input, and it produced a score above threshold X, confirming a match." This proof generation is computationally intensive and typically runs on a dedicated server or the user's device if feasible.

On the verification side, you need a lightweight verifier contract deployed on a blockchain like Ethereum or a zk-rollup. This contract contains the verification key corresponding to the prover's circuit. Its sole function is to accept a proof and public signals (like the claimed identity hash and the threshold score) and return true or false. The verification logic is cheap and fast, costing only gas for a few elliptic curve operations. This separation allows the trustless, decentralized verification of an identity claim without the chain ever seeing the model or the user's data, a principle known as verifiable computation.

Key design decisions include choosing the proof system (Groth16 for small proofs, PLONK for universal setups), the ML model complexity (heavier models increase proof time), and data representation. For instance, you must quantize model weights to finite field elements compatible with zk-SNARK arithmetic. A practical implementation might use the EZKL library to export a PyTorch model to a Halo2 circuit. The architecture must also handle oracle services for fetching private model parameters securely and identity registries (like Ethereum Name Service for decentralized identifiers) to map proven hashes to user accounts.

In production, consider a hybrid approach where frequent, low-stake checks use optimistic attestations, while high-value actions (like asset transfers) require a full zkML proof. Monitoring proof generation latency and gas costs for verification is critical. Emerging L2 solutions like zkSync Era and StarkNet offer native zkVM environments that can streamline deployment. By architecting with zkML, you create identity systems that are not only private and secure but also interoperable across Web3 applications, from DAO governance to compliant DeFi access, without centralized data custodians.

prerequisites
ARCHITECTURAL FOUNDATION

Prerequisites and System Requirements

Before building a zkML system for identity verification, you need to establish the core technical stack and understand the computational requirements for zero-knowledge proofs.

A functional zkML identity system requires a specific software and hardware stack. On the software side, you need a zero-knowledge proof framework like Circom with snarkjs, Halo2, or zk-SNARKs library such as libsnark. You'll also need a machine learning framework like PyTorch or TensorFlow for model training and a compiler like EZKL or Cairo to convert the trained model into a zk-circuit. A blockchain environment, typically an EVM-compatible chain like Ethereum or Arbitrum for on-chain verification, completes the core toolchain. Version control with Git and a package manager like npm or pip are essential for development.

The hardware requirements are dictated by the proof generation phase, which is computationally intensive. For development and testing, a modern multi-core CPU (e.g., 8+ cores) and 16GB+ of RAM are minimums. For production-scale systems, you will need access to high-performance servers or cloud instances (AWS EC2, GCP) with significant RAM (32GB+) and powerful CPUs, as generating a proof for a moderately complex model can take minutes and consume gigabytes of memory. GPU acceleration is becoming increasingly important; frameworks like CUDA-enabled ZK-GPU projects can drastically reduce proof generation times for large models.

You must have a pre-trained machine learning model that performs the identity verification task, such as facial recognition or document validation. This model needs to be quantized or simplified to reduce its computational complexity, as the number of constraints in a zk-circuit directly impacts proof generation cost and time. The model's architecture (e.g., number of layers, operations) must be compatible with your chosen ZK framework's supported operations (e.g., convolutions, matrix multiplications). Understanding the model's input/output schema is critical for designing the corresponding circuit's public and private inputs.

Developers need proficiency in several domains: circuit design for the ZK framework, smart contract development in Solidity or Rust for the verifier, and machine learning principles to handle model conversion. Familiarity with cryptographic primitives (hash functions, elliptic curves) and the trust assumptions (trusted setup, transparent setup) of your chosen proof system is non-negotiable. Setting up a local development environment that integrates the ML pipeline, circuit compiler, and a local blockchain testnet (Hardhat, Foundry) is the first practical step.

Finally, consider the system's operational requirements. You need a secure method for users to submit private inputs (e.g., biometric data) to a prover service without leaking information. The architecture must plan for oracle services or secure enclaves if real-world data is needed, and define the trust model for the prover and verifier components. Cost analysis for on-chain verification gas fees and off-chain proof generation is required to ensure the system's economic viability.

system-architecture
SYSTEM ARCHITECTURE OVERVIEW

How to Architect a zkML System for Identity Verification

A practical guide to designing a system that uses zero-knowledge machine learning (zkML) to verify user identity without exposing sensitive data.

A zkML system for identity verification combines zero-knowledge proofs (ZKPs) with machine learning models to prove a user meets certain criteria—like being over 18 or a unique human—without revealing the underlying data. The core architectural challenge is separating the computationally heavy ML inference from the proof generation. A typical design involves three main components: a prover service that runs the model and generates a ZKP, a verifier contract on-chain that checks the proof, and a client application that submits user data. This separation ensures the private model weights and user data never leave the prover's secure environment.

The first step is model selection and preparation. You need a machine learning model suitable for the verification task, such as a model for age estimation from an image or liveness detection. This model must be converted into a format compatible with a ZK circuit compiler like zkML (EZKL) or Cairo. This often involves exporting the model (e.g., an ONNX file from PyTorch) and defining the public inputs (the statement to be proven) and private inputs (the sensitive user data). The model's architecture significantly impacts proof generation time and cost, making efficiency a key design constraint.

The prover service is the system's trust anchor. It must be hosted in a secure, attestable environment (like a TEE or a trusted server) because it has access to both the private ML model and the user's raw data. Its job is to execute the model inference on the provided data and generate a zk-SNARK or zk-STARK proof attesting to the correct execution and the output. For example, it can prove "the model inference on this private facial image resulted in a liveness score > 0.9" without leaking the image or the exact score. Libraries such as Halo2, Circom, or StarkWare's Cairo are used here.

On the blockchain side, a lightweight verifier smart contract is deployed. This contract contains the verification key corresponding to the prover's circuit. It has a single, gas-efficient function that accepts a proof and public inputs, verifies them, and updates the user's state if valid. On Ethereum, this might be a Verifier.sol contract generated by a toolkit like snarkjs. The client application then coordinates the flow: it collects user data, sends it to the prover service, receives the proof, and submits it to the verifier contract, finally granting the user a verifiable credential or on-chain attestation.

Critical design considerations include privacy (ensuring data never leaks), cost (optimizing proof generation time and on-chain verification gas), and trust assumptions (relying on the prover's integrity). For production, you must also plan for oracle updates to the model, proof aggregation to batch verifications, and revocation mechanisms. Frameworks like Worldcoin's ID system or Polygon ID exemplify this architecture, using zkML to create private, scalable identity protocols.

key-concepts
ARCHITECTURE GUIDE

Key Concepts for zkML Identity

Building a zkML identity system requires integrating privacy-preserving proofs with on-chain verification. This guide covers the core components and design patterns.

03

Identity Claim Circuits

The circuit is the program that defines the identity condition to be proven. It's written in a domain-specific language (DSL) and compiled into a format for proof generation.

  • Example Circuit Logic: Prove that a private input (hashed passport number) exists in a public Merkle tree of authorized identities, and that the holder's birth year is before 2006.
  • Essential Components:
    • Private inputs (secret credential).
    • Public inputs (root of the Merkle tree, nullifier).
    • Constraints that enforce the relationship between them.
  • Use zkKit or Circuits for ZK Identity repositories for common templates.
04

Privacy-Preserving Credential Storage

Sensitive identity data must never be stored on-chain. The system relies on off-chain data availability and cryptographic commitments.

  • Wallets (e.g., MetaMask, Privy) store the user's private credentials and seed phrase locally.
  • Decentralized Storage like IPFS or Ceramic can hold public credential schemas or attestations from issuers.
  • Commitment Schemes: The user submits a hash (commitment) of their credential to the blockchain. Later, they can prove knowledge of the pre-image in a ZKP.
  • Nullifiers: A unique hash derived from the credential prevents the same proof from being used twice, enabling anonymous but non-reusable claims.
05

Trusted Setup & Issuer Role

Many zk-SNARK circuits require a trusted setup ceremony to generate the proving and verification keys. For identity, the credential issuer is a critical trust anchor.

  • Performing a Trusted Setup: Use tools like snarkjs to run a Powers of Tau ceremony. For production, use a multi-party ceremony (e.g., Perpetual Powers of Tau) to decentralize trust.
  • The Issuer's Role: A trusted entity (government, DAO, KYC provider) cryptographically signs or attests to a user's credentials. The zk-circuit verifies this signature as part of the proof.
  • Example: The issuer signs a message containing the user's hashed data. The circuit checks this signature against the issuer's public key, which is hardcoded as a constant.
step-1-model-selection
MODEL ARCHITECTURE

Step 1: Selecting and Preparing the ML Model

The foundation of a zkML identity verification system is a machine learning model that is both accurate and efficient to prove. This step covers the critical decisions and technical preparations required before moving to the proving layer.

The first decision is model selection. For on-chain identity verification, you need a model that is zk-SNARK friendly. This means prioritizing architectures with operations that translate efficiently into arithmetic circuits, the computational model used by zero-knowledge proofs. Models relying heavily on ReLU activations, fixed-point arithmetic, and convolutional layers (when implemented with specific constraints) are generally more suitable than those using complex, non-arithmetic operations like softmax or certain normalization layers. Frameworks like EZKL and zkML (by 0xPARC) provide libraries to benchmark and convert models from PyTorch or ONNX into a circuit-compatible format.

Once a model architecture is chosen, it must be trained and quantized. Full 32-bit floating-point precision is prohibitively expensive to prove. Model quantization reduces the numerical precision of weights and activations (e.g., to 16-bit or 8-bit fixed-point), drastically shrinking the circuit size and proving time. This process often involves quantization-aware training (QAT) to minimize accuracy loss. The final, quantized model is then exported to an intermediate representation like ONNX, which serves as the standard input for zkML compilation tools.

The prepared ONNX model is compiled into a zk-SNARK circuit. This is done using a compiler like EZKL's ezkl compile command or Circom with custom templates. The compiler analyzes the computational graph, converting each operation (matrix multiplication, addition, ReLU) into a set of arithmetic constraints. The output is a circuit file (often a .r1cs file in Circom) and a corresponding proving key. This step defines the prover and verifier algorithms. It's crucial to profile the circuit's constraint count at this stage, as it directly impacts proving cost and time.

Finally, you must design the model's input and output interfaces for the blockchain. For identity verification, the input is typically a feature vector derived from a user's biometric or credential data. The output is a verification result, such as a similarity score or a binary decision. The circuit must be designed to accept these inputs as private witness values and output a public result that the verifier smart contract can consume. This often involves hashing the model's output on-chain to create a concise, verifiable commitment to the prediction.

step-2-circuit-design
ARCHITECTURE

Step 2: Designing the zkML Circuit

This step details the core computational logic that proves a user's identity without revealing their biometric data, defining the constraints and operations for the zero-knowledge proof.

The zkML circuit is the core program that encodes the identity verification logic into a set of arithmetic constraints. For a facial recognition system, this circuit takes two private inputs: the user's stored biometric template (a vector of facial features) and a new live capture. It performs a similarity calculation, such as computing the cosine similarity or Euclidean distance between the two vectors, and outputs a single public boolean: is_match. The critical property is that the circuit proves the similarity score exceeds a predefined threshold without revealing the raw feature vectors or the exact score.

To build this circuit, you use a zk-SNARK framework like Circom or Halo2. These frameworks allow you to define the mathematical operations as a Rank-1 Constraint System (R1CS) or Plonkish arithmetization. For example, a cosine similarity circuit would require constraints for vector normalization, dot product calculation, and threshold comparison. Each operation must be broken down into basic field arithmetic (addition, multiplication) that the proving system can verify. The circuit's witness consists of all private inputs and intermediate variables used in the computation.

Key design considerations include circuit size and complexity, which directly impact proving time and cost. Using a large, high-precision ML model (like a deep neural network) can create a circuit with millions of constraints, making it impractical. Therefore, most zkML identity systems use optimized, lighter models such as SqueezeNet or custom feature extractors designed for circuit efficiency. The choice of elliptic curve (e.g., BN254 for Ethereum, Pasta for Mina) also affects performance and compatibility with your target blockchain's verification smart contract.

Here is a simplified conceptual structure of a Circom circuit template for a basic Euclidean distance check:

circom
template VerifyFace(dimension) {
    // Private inputs: stored template and live capture
    signal input template[dimension];
    signal input live_capture[dimension];
    // Public output: match result
    signal output is_match;

    // Calculate squared Euclidean distance
    var sum = 0;
    for (var i = 0; i < dimension; i++) {
        var diff = template[i] - live_capture[i];
        sum += diff * diff;
    }
    // Component to check if distance < threshold^2
    component lt = LessThan(32); // Comparator component
    lt.in[0] <== sum;
    lt.in[1] <== THRESHOLD_SQUARED;
    // Output 1 if sum < threshold_squared (i.e., a match)
    is_match <== lt.out;
}

This circuit would be compiled to generate the proving key and verification key used in the next steps.

Finally, the circuit must be audited for security and correctness. This involves checking for common vulnerabilities like under-constrained circuits (which can accept invalid proofs), ensuring the threshold logic correctly reflects the desired false acceptance rate, and verifying that all operations are within the finite field's range to prevent overflows. The circuit's determinism is absolute; the same inputs must always produce the same proof. Once finalized, this circuit definition becomes the immutable blueprint for all subsequent proofs in your system.

step-3-prover-verifier-setup
ARCHITECTURE

Step 3: Building the Prover and On-Chain Verifier

This step details the core components of a zkML system: the off-chain prover that generates proofs and the on-chain verifier smart contract that validates them.

The prover is the off-chain component responsible for executing your machine learning model and generating a zero-knowledge proof of the result. You typically implement this in a language like Circom or Noir, which compiles your model's computational graph into an arithmetic circuit. For identity verification, this circuit would take private inputs (e.g., a user's biometric template) and public inputs (e.g., a claimed identity hash), run the model inference, and output a proof that the inference matched a predefined threshold without revealing the private data. Libraries like EZKL or Cairo can help transpile models from frameworks like PyTorch into these circuit languages.

The on-chain verifier is a smart contract deployed to a blockchain like Ethereum, Polygon, or a zk-rollup. Its sole function is to verify the cryptographic proof submitted by the prover. The contract contains the verification key generated during the trusted setup of your circuit. When a user submits a proof, the verifier contract runs a lightweight computation to check its validity. A successful verification returns true, which can trigger an on-chain action, such as minting a verifiable credential NFT or updating a registry. The gas cost for verification is a critical design consideration, as complex models require more expensive proofs.

Here is a simplified conceptual flow for an identity check: 1) A user's client hashes their biometric data to create a private witness. 2) The prover (e.g., a backend service) uses this witness and the public statement ("Does this match identity 0x123...?") to generate a zk-SNARK proof. 3) The proof is submitted to the verifier contract's verifyProof(bytes memory proof, uint256[] memory pubInputs) function. 4) The contract checks the proof against its embedded verification key and emits an event if valid. This entire process ensures the user's biometric data never leaves their device and is never stored on-chain.

Key technical decisions include choosing a proof system (Groth16 for small proofs, PLONK for universal setups), selecting a blockchain with affordable verification (zkEVMs, app-chains), and managing the trusted setup ceremony for your circuit. For production, you must also design secure off-chain infrastructure for proof generation, including rate-limiting and anti-sybil mechanisms to prevent abuse of the proving service.

TECHNICAL SPECS

ZKP Framework Comparison for zkML

Comparison of zero-knowledge proof frameworks for implementing machine learning inference in identity verification systems.

Framework FeatureCircomHalo2Noir

Primary Language

Circom (DSL) / Rust

Rust

Noir (DSL) / Rust

Proof System

Groth16 / PLONK

PLONK / KZG

PLONK / Barretenberg

zk-SNARK / zk-STARK

zk-SNARK

zk-SNARK

zk-SNARK

Trusted Setup Required

ML Library Support

Custom CircomLib

Custom Halo2 ML

Aztec Noir-ML

Proving Time (128x128 MatMul)

~12 sec

~8 sec

~15 sec

Proof Size

~2 KB

~3 KB

~1.5 KB

EVM Verification Gas Cost

~450k gas

~600k gas

~350k gas

Active Audits / Bug Bounties

integration-patterns
INTEGRATION WITH EXISTING IDENTITY STACKS

How to Architect a zkML System for Identity Verification

Integrating zero-knowledge machine learning (zkML) into identity verification systems allows for privacy-preserving credential checks. This guide outlines the architectural patterns for combining zkML proofs with established identity frameworks like OAuth, OpenID Connect (OIDC), and decentralized identifiers (DIDs).

A zkML identity system typically involves three core components: a prover, a verifier, and an identity provider. The prover is the user's client application that generates a zero-knowledge proof. This proof demonstrates that a private input (e.g., a biometric scan or document hash) passes a specific machine learning model's verification check, without revealing the input itself. The verifier is a smart contract or backend service that validates the proof's cryptographic integrity. The identity provider, which could be a traditional OIDC server or a blockchain-based DID resolver, issues and manages the user's core identity attestations.

The integration point is the verifiable presentation. Instead of sending raw data, the user presents a zkML proof alongside a standard identity token. For example, a system might require an OIDC id_token proving government ID issuance and a zkML proof that a live facial scan matches the photo in that ID. The verifier checks both: the OIDC token's signature via a JWKS endpoint and the zkML proof via a verifying key on-chain. Frameworks like Circom and Halo2 are used to compile ML models into arithmetic circuits, which generate these Succinct Non-interactive ARguments of Knowledge (SNARKs).

Architecturally, you must decide where proof verification occurs. On-chain verification (e.g., in an Ethereum smart contract using the Verifier.sol generated by Circom) is trust-minimized but has high gas costs and latency. Off-chain verification via a secure enclave or a trusted service is faster and cheaper but introduces a trust assumption. A hybrid approach uses an off-chain verifier for speed, with periodic attestations of its correctness posted on-chain. The choice depends on your threat model and whether the verification result needs to be a consensus state (like for a DAO vote) or a private service decision (like KYC for an exchange).

To implement this, start by defining the ML model for your verification task, such as a liveness detection or document authenticity classifier. Convert this model into a zk circuit using a library like EZKL. Your backend identity service must then expose two new endpoints: one to fetch the circuit's verifying key and another to accept proof submissions. The client flow involves: 1) authenticating with the identity provider, 2) running the ML model on private data locally, 3) generating the zk proof using the circuit, and 4) submitting both the identity token and the proof to the verifier endpoint.

Key challenges include circuit complexity—large neural networks produce huge proofs—and model confidentiality. You may need to use techniques like model quantization or leverage zk-friendly ML architectures. Furthermore, the identity provider must support binding the proof to a specific session or user to prevent replay attacks. This is often done by including a nonce or a unique claim in the identity token that must also be an input to the zk circuit. Projects like Worldcoin's Orb and Polygon ID demonstrate practical implementations of these patterns, combining biometrics with blockchain-based identity.

ZKML ARCHITECTURE

Frequently Asked Questions

Common technical questions and solutions for developers building zero-knowledge machine learning systems for identity verification.

A zkML system for identity verification typically follows a three-component architecture:

  1. Prover Client: Runs on the user's device. It takes a private input (e.g., a biometric template), executes the ML model (like a facial recognition CNN), and generates a zero-knowledge proof (ZKP). This proof attests that the model output (e.g., a match score) meets a verification threshold without revealing the input data.

  2. Verifier Smart Contract: Deployed on-chain (e.g., Ethereum, Polygon). This is a lightweight, gas-optimized contract written in a ZK-friendly language like Circom or Cairo. It contains the verification key and the public inputs (e.g., a public commitment to the authorized user's template). Its sole job is to verify the submitted ZKP.

  3. Trusted Setup & Circuit: The zk-SNARK circuit, defined in a domain-specific language, encodes the logic of the ML model and the verification rule. This circuit requires a one-time trusted setup ceremony (e.g., using Perpetual Powers of Tau) to generate the proving and verification keys. The circuit is the single source of truth defining the computation's correctness.

conclusion-next-steps
ARCHITECTURAL SUMMARY

Conclusion and Next Steps

This guide has outlined the core components and design considerations for building a zkML system for identity verification. The next steps involve implementation, testing, and integration.

You now have a blueprint for a system that uses zero-knowledge proofs to verify identity claims without revealing the underlying data. The core workflow involves: (1) a user generating a ZK proof from their private credentials using a zkML circuit, (2) submitting this proof to a verifier smart contract on-chain, and (3) the contract validating the proof to grant access or attestation. This architecture decouples computation from verification, keeping sensitive biometric or KYC data off-chain while providing cryptographic certainty of the result on-chain.

For implementation, start by defining your specific verification logic in a circuit framework like Circom or Halo2. A practical next step is to write and test a circuit for a concrete rule, such as "prove age is over 18 from a hashed passport date." Use libraries like circomlib for fundamental components. Thoroughly test the circuit's constraints and proof generation time locally before integrating it with a proving backend, such as SnarkJS for Groth16 or a zkVM like RISC Zero for more complex models.

The final integration phase involves deploying your verifier contract, typically generated from your circuit's verification key. For Ethereum, use the SnarkJS generatecall command to create a Solidity verifier. On other chains like zkSync Era or Starknet, you'll use their native proof systems (e.g., ZK Stack, Cairo). Ensure your front-end application can seamlessly interact with the prover (client-side or via a trusted service) and the on-chain verifier. Consider gas costs and use batching or proof aggregation for scalability.

Future enhancements to explore include privacy-preserving data aggregation for model retraining, using oracles for real-world attestations, and implementing revocation mechanisms for credentials. The field of zkML is rapidly evolving, with new proving systems and hardware accelerators emerging. To stay current, follow developments from teams like Modulus Labs, EZKL, and Giza, and experiment with testnets before mainnet deployment. The goal is to move from a functional prototype to a robust, production-ready system that balances privacy, security, and usability.

How to Architect a zkML System for Identity Verification | ChainScore Guides | ChainScore Labs