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Glossary

Homomorphic Encryption (HE)

Homomorphic Encryption (HE) is a form of encryption that allows specific types of computations to be performed directly on ciphertext, generating an encrypted result that, when decrypted, matches the result of operations performed on the plaintext.
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definition
CRYPTOGRAPHY

What is Homomorphic Encryption (HE)?

A form of encryption that allows computations to be performed directly on encrypted data without needing to decrypt it first.

Homomorphic Encryption (HE) is a cryptographic method that enables computations—such as addition or multiplication—to be performed on ciphertext, generating an encrypted result which, when decrypted, matches the result of the same operations performed on the original plaintext. This property, known as homomorphism, preserves the structure of the data even in its encrypted state. Unlike traditional encryption, which requires decryption before any processing, HE allows data to remain confidential throughout its entire lifecycle, even while being used in a computation by an untrusted third party, such as a cloud server.

The core types of HE are categorized by the operations they support. Partially Homomorphic Encryption (PHE) schemes support only one type of operation (either addition or multiplication) indefinitely. Somewhat Homomorphic Encryption (SHE) supports both operations but only for a limited number of computations before noise overwhelms the ciphertext. Fully Homomorphic Encryption (FHE), a major breakthrough, supports an unlimited number of both addition and multiplication operations, enabling arbitrary computations on encrypted data. Modern research and implementations, like the BGV, BFV, and CKKS schemes, focus on making FHE more efficient and practical for real-world use.

The primary application of HE is in privacy-preserving cloud computing and secure data outsourcing. A client can encrypt sensitive data—such as medical records or financial information—and send it to a cloud service. The service can then perform analytics, machine learning model training, or database queries on the encrypted data without ever accessing the plaintext, returning only the encrypted result to the client for decryption. This creates a powerful paradigm for confidential computing, ensuring data privacy even in shared or untrusted environments.

Despite its promise, HE faces significant challenges, primarily around computational overhead and ciphertext expansion. Performing operations on encrypted data is orders of magnitude slower than on plaintext, and the encrypted data (ciphertext) can be vastly larger than the original input. Ongoing advancements in hardware acceleration (using GPUs, FPGAs, or specialized ASICs) and more efficient cryptographic schemes are critical to making homomorphic encryption viable for large-scale, latency-sensitive applications beyond niche security use cases.

In the blockchain and Web3 space, HE enables novel privacy-preserving smart contracts and confidential decentralized finance (DeFi) protocols. For example, a blockchain could use HE to validate transactions or execute contract logic on encrypted state data, allowing for private auctions, shielded voting, or confidential asset transfers without revealing sensitive amounts or participant identities on the public ledger. This bridges the gap between the transparency of public blockchains and the privacy requirements of enterprises and individuals.

how-it-works
CRYPTOGRAPHIC PRIMITIVE

How Does Homomorphic Encryption Work?

Homomorphic encryption (HE) is a form of encryption that allows computations to be performed directly on encrypted data without requiring decryption first.

Homomorphic encryption (HE) is a cryptographic scheme that enables computations on ciphertexts, generating an encrypted result which, when decrypted, matches the result of operations performed on the plaintext. This property, known as homomorphism, allows a third party (like a cloud server) to process sensitive data—such as financial records or medical information—without ever seeing it in its raw, unencrypted form. The fundamental promise is to maintain data confidentiality during computation, a critical requirement for privacy-preserving technologies in decentralized systems and secure cloud computing.

The mechanism relies on complex mathematical structures, primarily lattice-based cryptography or schemes like Brakerski/Fan-Vercauteren (BFV) and Cheon-Kim-Kim-Song (CKKS). These schemes create a mapping where algebraic operations (addition, multiplication) on encrypted data correspond predictably to operations on the original data. For example, encrypting two numbers, E(5) and E(3), and then multiplying the ciphertexts E(5) * E(3) would yield E(15) upon decryption. This process requires no secret key during the computation phase, shifting the trust requirement from the processor to the key holder.

Implementing HE involves significant technical challenges, primarily computational overhead and ciphertext expansion. Operations on encrypted data are orders of magnitude slower than on plaintext, and the encrypted data (ciphertext) can be vastly larger than the original input. Modern partial homomorphic encryption schemes support either addition or multiplication indefinitely, while fully homomorphic encryption (FHE) schemes, pioneered by Craig Gentry, support both but require periodic "bootstrapping"—a computationally intensive process to "refresh" the ciphertext and enable further operations. This makes FHE a topic of intense research for practical scalability.

In blockchain and Web3, homomorphic encryption enables novel privacy-preserving smart contracts and confidential decentralized finance (DeFi) applications. It allows for the verification of transactions or the execution of financial logic on encrypted balances, ensuring user privacy while maintaining public auditability on-chain. This is a key building block for zero-knowledge proofs (ZKPs) and secure multi-party computation (MPC), where multiple parties can jointly compute a function over their private inputs without revealing them. Projects exploring this frontier aim to reconcile transparency with confidentiality in decentralized networks.

The future of homomorphic encryption hinges on algorithmic optimizations and hardware acceleration (like FHE accelerators). As these technologies mature, HE could become a standard layer for secure data processing across industries, from private machine learning model training on aggregated user data to confidential cross-chain asset transfers. Its role is to act as a fundamental cryptographic primitive that redefines how trust is distributed in computational systems, moving from trusting the processor's environment to trusting only the cryptographic protocol itself.

key-features
CORE MECHANISMS

Key Features of Homomorphic Encryption

Homomorphic Encryption (HE) enables computations on encrypted data without decryption, preserving data privacy. Its key features define its security, performance, and practical applications.

01

Data Privacy by Design

Homomorphic Encryption ensures that sensitive data, such as medical records or financial information, never needs to be decrypted for processing by a third party. This is the fundamental privacy guarantee, enabling secure outsourced computation where the server performing the calculations learns nothing about the underlying data or the results.

02

Computational Overhead

The primary trade-off for privacy is significant computational overhead. HE operations are vastly more resource-intensive than plaintext operations, involving complex polynomial mathematics and resulting in substantial ciphertext expansion. This makes performance a key constraint for real-world deployment.

03

Types of Homomorphism

HE schemes are categorized by the operations they support on ciphertexts:

  • Partially Homomorphic Encryption (PHE): Supports only one type of operation (e.g., only addition or multiplication) indefinitely. Example: Paillier (additive).
  • Somewhat Homomorphic Encryption (SHE): Supports both addition and multiplication but only for a limited number of operations.
  • Fully Homomorphic Encryption (FHE): Supports both addition and multiplication an unlimited number of times, enabling arbitrary computations.
04

Bootstrapping

Bootstrapping is a critical technique in Fully Homomorphic Encryption that refreshes a ciphertext, reducing the "noise" that accumulates with each computation. This process allows for an unlimited number of operations, making the scheme "fully" homomorphic, but it is computationally expensive.

05

Practical Use Cases

Despite overhead, HE enables novel applications:

  • Private Medical Analysis: Hospitals can outsource genomic analysis on encrypted patient data.
  • Secure Financial Audits: Auditors can verify transactions on encrypted ledgers.
  • Privacy-Preserving Machine Learning: Train models on encrypted datasets from multiple sources.
  • Encrypted Data Search: Query encrypted databases without revealing the search terms or results.
06

Related Cryptographic Primitives

HE is part of a broader family of privacy-enhancing technologies:

  • Secure Multi-Party Computation (MPC): Computes on distributed data shares.
  • Zero-Knowledge Proofs (ZKPs): Prove statement validity without revealing underlying data.
  • Functional Encryption: Decrypts a ciphertext to reveal only the result of a specific function on the data, not the data itself.
types-and-schemes
HOMOMORPHIC ENCRYPTION

Types and Common Schemes

Homomorphic Encryption (HE) is not a single algorithm but a class of cryptographic schemes, each offering different trade-offs between computational complexity, security, and the types of operations supported.

01

Partially Homomorphic Encryption (PHE)

A scheme that supports an unlimited number of operations of a single type (either addition or multiplication) on ciphertexts. It is the most efficient and practical form of HE for specific use cases.

  • Examples: RSA (multiplicative), ElGamal (multiplicative), Paillier (additive).
  • Use Case: Secure voting systems using Paillier for tallying encrypted votes without decryption.
02

Somewhat Homomorphic Encryption (SHE)

A scheme that supports both addition and multiplication on ciphertexts, but only for a limited number of operations. After a certain depth of computation, noise grows and corrupts the ciphertext. Bootstrapping is required to continue.

  • Foundation: Early schemes like BGN (Boneh–Goh–Nissim) and early versions of BGV/BFV were SHE.
  • Limitation: Practical only for circuits (computations) of a predefined, shallow depth.
03

Fully Homomorphic Encryption (FHE)

The 'holy grail' of HE, allowing an unlimited number of both addition and multiplication operations on ciphertexts. First realized by Craig Gentry in 2009 using a bootstrapping technique to manage noise growth.

  • Core Mechanism: Bootstrapping refreshes a ciphertext, reducing noise and enabling further computations.
  • Trade-off: Bootstrapping is computationally intensive, making FHE orders of magnitude slower than PHE or SHE.
04

BFV/BGV Schemes

Two closely related Ring Learning With Errors (RLWE)-based FHE schemes that operate on integer arithmetic. They are among the most widely implemented and studied FHE schemes.

  • BFV (Brakerski/Fan-Vercauteren): Optimized for efficient integer arithmetic and often used for applications like private machine learning inference.
  • BGV (Brakerski-Gentry-Vaikuntanathan): Similar to BFV but uses a different noise management technique. Often considered together in libraries like Microsoft SEAL.
05

CKKS Scheme

A Cheon-Kim-Kim-Song (CKKS) scheme is an RLWE-based FHE method designed for approximate arithmetic on real or complex numbers. It is the primary scheme for privacy-preserving machine learning.

  • Key Feature: Encrypts numbers with inherent approximation error, trading perfect precision for much greater efficiency in computations like matrix multiplications and activation functions.
  • Primary Use: Enabling neural network inference on encrypted data without revealing the model or the input.
06

TFHE Scheme

Fast Fully Homomorphic Encryption over the Torus (TFHE) is a scheme optimized for Boolean circuit evaluation (AND, OR, NOT, XOR gates) with very fast bootstrapping.

  • Operation: Encrypts single bits and performs logical gate operations homomorphically.
  • Advantage: Extremely fast bootstrapping (milliseconds per gate) makes it suitable for complex, deep Boolean circuits where other schemes would be impractical.
  • Use Case: Secure evaluation of arbitrary functions expressed as binary circuits.
ecosystem-usage
PRIVACY-PRESERVING COMPUTATION

Ecosystem Usage in Web3 & Blockchain

Homomorphic Encryption (HE) is a cryptographic method that enables computations on encrypted data without needing to decrypt it first. In Web3, it's a foundational technology for building privacy-preserving applications, allowing sensitive data to be processed while remaining confidential.

01

Core Cryptographic Principle

Homomorphic Encryption is a form of encryption that allows specific types of computations to be performed directly on ciphertext, generating an encrypted result which, when decrypted, matches the result of operations performed on the plaintext. This property is categorized by the operations it supports:

  • Partially Homomorphic Encryption (PHE): Supports one operation (e.g., addition or multiplication) an unlimited number of times.
  • Somewhat Homomorphic Encryption (SHE): Supports both addition and multiplication, but only for a limited number of operations.
  • Fully Homomorphic Encryption (FHE): Supports both addition and multiplication an unlimited number of times, enabling arbitrary computations on encrypted data.
02

Private Smart Contracts & dApps

HE enables confidential smart contracts where transaction details and state changes remain encrypted. This is critical for applications requiring privacy, such as:

  • Private Voting & Governance: Casting encrypted votes on-chain where the tally is computed without revealing individual choices.
  • Sealed-Bid Auctions: Submitting encrypted bids, with the winner determined without exposing other bids.
  • Private DeFi: Executing financial transactions (e.g., loans, trades) without leaking sensitive position data or amounts to the public ledger. Projects like Fhenix and Inco are building FHE-enabled Layer 1 and Layer 2 blockchains to bring this capability to Web3.
03

Secure Data Oracles & MEV Protection

HE addresses critical trust issues in blockchain data feeds and transaction ordering:

  • Private Oracles: Sensitive off-chain data (e.g., credit scores, medical records) can be encrypted before being sent to an oracle. Smart contracts can then compute using this encrypted data without ever seeing the raw information.
  • Miner/Maximal Extractable Value (MEV) Mitigation: Users can submit encrypted transactions. Validators or sequencers can order and include them in a block without being able to front-run or sandwich the transactions, as the contents remain hidden until after block confirmation.
04

Confidential Identity & Authentication

HE allows for verification of credentials without exposing the underlying data, a key component for decentralized identity (DID) and Zero-Knowledge-adjacent systems.

  • Proof of Compliance: A user can prove they are over a certain age or hold a specific credential by providing an encrypted proof that a smart contract can verify.
  • Private Access Control: Granting access to a resource based on encrypted attributes, ensuring the resource provider never learns the user's specific traits. This moves beyond simple anonymity to provide selective disclosure and computational privacy.
05

Key Technical Challenges

Despite its promise, HE faces significant hurdles for mainstream Web3 adoption:

  • Computational Overhead: FHE operations are orders of magnitude slower and more resource-intensive than plaintext computations, leading to high gas costs and latency.
  • Ciphertext Expansion: Encrypted data (ciphertext) is much larger than the original plaintext, increasing blockchain storage and bandwidth requirements.
  • Complex Key Management: Systems often require multiple keys (public, private, evaluation) and sophisticated protocols for secure generation and distribution. Ongoing research in hardware acceleration (e.g., GPUs, FPGAs) and more efficient cryptographic schemes (like CKKS for approximate arithmetic) aims to mitigate these issues.
06

Comparison with Zero-Knowledge Proofs

HE and Zero-Knowledge Proofs (ZKPs) are complementary privacy technologies with different core functions:

  • Homomorphic Encryption: Focuses on private computation. Data is encrypted, processed while encrypted, and results remain encrypted for the user to decrypt.
  • Zero-Knowledge Proofs: Focus on private verification. They prove a statement is true (e.g., 'I have a valid password') without revealing the underlying data used to generate the proof. Hybrid systems are emerging. For example, using HE to perform private computations and a ZKP to generate a verifiable proof that the computation was executed correctly on the encrypted data, combining privacy with auditability.
examples
HOMOMORPHIC ENCRYPTION

Practical Use Cases and Examples

Homomorphic encryption enables computation on encrypted data without decryption, unlocking privacy-preserving applications across finance, healthcare, and blockchain.

02

Secure Medical Data Analysis

Hospitals and research institutions can outsource analysis of encrypted patient genomes or medical records to powerful cloud servers. The cloud performs computations—like identifying statistical correlations for drug research or running diagnostic algorithms—on the ciphertext. Only the final, aggregated result is decrypted by the data owner, preserving individual patient privacy.

03

Encrypted Search & Database Queries

Users can search an encrypted database without the server learning the query or the results. For example, a client encrypts a search term like "Q4 Sales." The server performs the search on the encrypted database and returns the encrypted results, which only the client can decrypt. This is a core application of Partially Homomorphic Encryption (PHE) and Somewhat Homomorphic Encryption (SHE).

05

Secure Voting & Surveys

Enables fully verifiable, anonymous voting systems. Each vote is encrypted before submission. Tallying authorities can homomorphically sum the encrypted ballots to compute the final result without ever decrypting individual votes, ensuring voter privacy is mathematically guaranteed. The process can be audited to prove the tally is correct without compromising secrecy.

06

Federated Learning Enhancement

HE strengthens privacy in federated learning, where models are trained on decentralized devices. Instead of sending raw model updates, devices send encrypted updates to a central server. The server can aggregate these encrypted gradients to improve the global model. This prevents the server from learning sensitive patterns from any single user's data, addressing a key vulnerability.

COMPARISON

Homomorphic Encryption vs. Related Technologies

A technical comparison of Homomorphic Encryption with other cryptographic and privacy-preserving techniques, highlighting their core mechanisms, data utility, and primary use cases.

Feature / AttributeHomomorphic Encryption (HE)Secure Multi-Party Computation (MPC)Zero-Knowledge Proofs (ZKPs)Trusted Execution Environments (TEEs)

Core Cryptographic Principle

Computations on ciphertext

Secret sharing among parties

Proof of statement validity

Hardware-enforced isolation

Data Privacy During Computation

Data Utility / Output

Encrypted computation result

Jointly computed result

Proof of correctness

Plaintext result inside secure enclave

Requires Data Decryption for Computation

Primary Trust Model

Cryptographic (trust in math)

Distributed (majority of parties honest)

Cryptographic (trust in math)

Hardware vendor & implementation

Computational Overhead

Very High (1000x - 1,000,000x)

High (network & crypto ops)

High (proof generation)

Low (near-native speed)

Typical Latency

Seconds to hours

Network-bound seconds

Seconds to minutes

Milliseconds

Ideal Use Case

Outsourced analytics on encrypted data

Joint calculations without sharing inputs

Proving compliance or knowledge

High-performance confidential computing

security-considerations
HOMOMORPHIC ENCRYPTION

Security Considerations and Limitations

While homomorphic encryption enables computation on encrypted data, its practical application is constrained by significant performance overhead and nuanced security models that must be carefully evaluated.

01

Computational Overhead

The primary limitation of Homomorphic Encryption (HE) is its immense computational cost. Performing operations on ciphertext is orders of magnitude slower than on plaintext. For example, a simple multiplication in Fully Homomorphic Encryption (FHE) can be 10,000 to 1,000,000 times slower than its plaintext counterpart. This overhead makes it currently impractical for high-throughput, real-time applications without specialized hardware acceleration.

02

Ciphertext Expansion

HE schemes cause significant ciphertext expansion, where encrypted data is much larger than the original plaintext. A single bit of data can expand into kilobytes of ciphertext. This impacts:

  • Storage costs: Requiring substantially more disk space.
  • Network bandwidth: Increasing latency for data transfer.
  • Memory usage: Limiting the complexity of computations that can be performed in-memory. Managing this expansion is a critical systems engineering challenge.
03

Security Model Assumptions

HE security rests on specific cryptographic hardness assumptions, most commonly the Learning With Errors (LWE) problem or its ring-based variant (RLWE). Limitations include:

  • Parameter selection: Incorrectly chosen security parameters (e.g., polynomial degree, ciphertext modulus) can weaken the scheme.
  • Quantum vulnerability: While LWE/RLWE are considered post-quantum secure, specific implementations may have weaknesses.
  • Trusted setup: Some HE schemes require a trusted party to generate public parameters, creating a potential single point of failure.
04

Limited Operation Set & Precision

HE supports a restricted set of operations, typically addition and multiplication over integers or fixed-point numbers. Key limitations are:

  • No native comparisons: Operations like > or == are not directly possible without complex, expensive workarounds.
  • Limited precision: Representing floating-point numbers or performing complex functions (e.g., division, logarithms) requires approximation techniques, introducing computational error.
  • Circuit depth limits: In Somewhat Homomorphic Encryption (SHE), noise growth limits the number of sequential multiplications possible before decryption fails.
05

Key Management Complexity

Robust key management is more complex than in standard encryption. Considerations include:

  • Secret key distribution: The entity performing decryption must securely hold the secret key, creating a central trust point.
  • Key rotation: Changing keys requires re-encrypting all data, which is highly expensive due to ciphertext expansion.
  • Multi-key & threshold schemes: Enabling computations on data encrypted under different keys (e.g., from multiple parties) adds significant cryptographic and operational overhead.
06

Side-Channel & Implementation Attacks

Like all cryptography, HE implementations are vulnerable to side-channel attacks that exploit physical leaks (timing, power consumption, electromagnetic emissions). Defenses are non-trivial because:

  • Complex operations have variable execution paths that can leak secret key material.
  • Protections like masking further increase the already substantial computational overhead.
  • Formal verification of HE libraries and circuits is essential but challenging, leaving room for subtle bugs that compromise security.
FAQ

Common Misconceptions About Homomorphic Encryption

Homomorphic Encryption (HE) is a powerful cryptographic technique, but its complexity often leads to misunderstandings about its capabilities, performance, and applications. This section clarifies the most frequent points of confusion.

No, homomorphic encryption and end-to-end encryption are fundamentally different cryptographic paradigms. End-to-end encryption (E2EE) is designed for secure data transmission, ensuring data is encrypted on the sender's device and only decrypted on the recipient's device. In contrast, Homomorphic Encryption (HE) is designed for secure data computation, allowing specific mathematical operations to be performed directly on encrypted data without ever decrypting it. While E2EE protects data in transit, HE protects data in use, enabling privacy-preserving analytics and outsourcing computation to untrusted servers (like the cloud) while keeping the raw data secret.

HOMOMORPHIC ENCRYPTION

Frequently Asked Questions (FAQ)

Homomorphic Encryption (HE) is a cryptographic technique that enables computation on encrypted data. This section answers common technical questions about its mechanisms, applications, and role in blockchain and privacy-preserving technologies.

Homomorphic Encryption (HE) is a form of encryption that allows computations to be performed directly on encrypted data, producing an encrypted result that, when decrypted, matches the result of the same operations performed on the original plaintext. It works by using specialized cryptographic schemes, such as BGV, BFV, or CKKS, that preserve the algebraic structure of the data. For example, given two encrypted values E(a) and E(b), a third party can compute E(a + b) or E(a * b) without ever learning the values of a or b. This enables secure outsourced computation, where sensitive data can be processed by untrusted servers (like cloud providers) while remaining confidential.

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